Coding

Part:BBa_J07009

Designed by: mit_igem_2005   Group: iGEM2005   (2005-07-07)

toxicity-gene activator from Vibrio cholerae

shortened BBa_J07008. Typical ToxR-periplasm-region subsitutions are done at aa 211. explanation of ToxR domains at http://model.mit.edu/igem/images/d/d7/Kolmar95.pdf

ToxR gene with shortened periplasmic terminus. The downstream portion of this gene was specified to be fusable to another protein.

ELIMINATE XbaI SITE PLZZZZZ


Usage and Biology

This transcription activator controls cholera toxin, pilus colonization factor and outer membrane protein expression in V.cholerae. It binds to the 5'-TTTTGAT-3' tandemly repeated DNA sequence in the cholera toxin promoter region. ToxS interacts with the C-terminal periplasmic domain of toxR, stimulating its activity. It activates transcription at the promoters for tcpI and tcpA and this is presumably via toxT.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//cds
//cds/membrane/receptor
//cds/transcriptionalregulator/activator
//function/regulation/transcriptional
Parameters
directionForward
functionAct
ligandsToxS
proteinToxR
swissproP15795
tagNone